Release History

 

CDNO releases - more detail on the CDNO GitHub

Version Release Date ID Updates
3.1 Apr 2022 2022-04-06
  • Mineral nutrient class
    • Added 180 mineral nutrient terms discussed in issue #70, the framework with the proposal can be found in the following link, other terms that are in the framework but are not included in this release will be added in other versions when we solved issue #30.
    • 17 terms were defined and classified within the macro elements and trace elements subclasses and are unique terms from CDNO, such as dietary calcium [CDNO:0000015], dietary sulfur[CDNO:0000021], etc.
    • 163 terms from CHEBI were imported into the CDNO classification, which involved the inclusion of integration of 33 terms in CHEBI using the CHEBI submission tool.
    • 9 CHEBI terms are duplicated twice as they have more than one parent in the mineral nutrient classification (e.g. calcium sulfate is a inorganic sulfate salt and is a inorganic calcium salt.

  • Protein class
    • Added 10 proteins under the protein class, from these only one protein has been added in CHEBI using the CHEBI submission tool beta-lactoglobulin [CHEBI:190519].a three new major classes 'dietary_role' #65, 'nutritional_functional_attribute' #66 and 'dietary_material_physical_attribute' #67

  • Added three new ROBOT temples as .csv files.
  • Added parent terms from PATO such as 'quality' [PATO:0000001] and 'physical quality' [PATO:0001018].
  • Added parent terms from BFO such as 'role' [BFO:0000023]
3.0 Jan 2022 2022-01-10
  • Added three new major classes 'dietary_role' #65, 'nutritional_functional_attribute' #66 and 'dietary_material_physical_attribute' #67.
  • Added three new ROBOT temples as .csv files.
  • Added parent terms from PATO such as 'quality' [PATO:0000001] and 'physical quality' [PATO:0001018].
  • Added parent terms from BFO such as 'role' [BFO:0000023]
2.2 Oct 2021 2021-10-20
  • Added 25 new terms that include vitamins according to the issue #57
  • Added one term mentioned in issue #56 ‘methylmercury compound’ as a subclass of ‘trace element’
  • Edited Xreferences from INFOODs and USDA Data Central as raised in issue #49, so that the Xrefs reflect 1 to1 relationships. This is not yet complete. ‘dietary nutritional component’ now appears as a subclass of the ‘material entity’ term, mentioned in issue #69, the term.
2.1 Sept 2021 2021-09-09
  • Contains the changes in the classification of 'vitamins' has been discussed in issue-57. The terms 'water-' and 'fat-soluble vitamin' were deleted in order to be added as roles in the future 'dietary role' class as described in issue-65.
  • Other changes include the switch from CDNO labels incorporated as hasRelatedSynonym or ExactSynonym to CHEBI original labels.
2.0June 2021 2021-06-01
  • The initial release (2021-02-08) was experimental and we had not yet established the wider user-base. For this reason, we opted to change the axioms within the chemical concentration's while keeping the IDs the same. So, no deprecation and replacement were needed.
  • Version V2.0 includes the change of the the ontology name from Crop Dietary Nutrition Ontology to Compositional DNO. This changed has been approved by the OBO foundry in the issue #1483.
  • In order to change the name from Crop to Compositional DNO, we changed plant structure in the design pattern of the class concentration of dietary nutritional component [CDNO:0000001]: 'concentration of' [PATO:0000033] and inheres in some ( 'dietary nutritional component' [CDNO:0000001] and part of some 'plant structure' [PO:0009011]) for material entity: 'concentration of' [PATO:0000033] and inheres in some ( 'dietary nutritional component' [CDNO:0000001] and part of some 'material_entity' [BFO:0000015])
1.0
  • First release of pilot 'Crop Dietary Nutritional Ontology'